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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Brock Bedard | 13th | Carlos Aragon | 12th | 10th |
| First Basemen | Daniel Hernandez | 1st | George Campbell | 3rd | 1st |
| Second Basemen | Tom Boatright Jr. | 5th | Ronny Vallesteros | Tied for 6th | 3rd |
| Third Basemen | Josh Harney | 6th | Mike Ernst | 5th | 3rd |
| Shortstops | Pat Peters | 19th | Gustavo Londono | Tied for 5th | 13th |
| Left Fielders | Chris Harper | 5th | Jim Littlefield | 3rd | 4th |
| Center Fielders | Manny Barragan | 8th | Trevor Hargraves | 15th | 16th |
| Right Fielders | David Felmlee | 3rd | Tied for 20th | 17th | |
| Starting Pitchers | Alfonso Garbiso | 9th | Jonathan Callahan | 11th | 8th |
| Relievers | David Fernandez | 7th | Jose Gonzales | 15th | 11th |
| Closers | Joaquin Cedeno | 21st | Igor Barbier | 11th | 16th |
