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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Lonnie Evenson | 4th | Matt Clausen | 7th | 4th |
| First Basemen | Raul Aponte | 15th | Raul Aponte | Tied for 18th | 15th |
| Second Basemen | Ben Duyck | 12th | Dan Cross | 15th | 11th |
| Third Basemen | Sean Friedman | 8th | Sean Friedman | 4th | 5th |
| Shortstops | Josh Tippett | 17th | William Nanod | 8th | 9th |
| Left Fielders | Jeff Price | 15th | Eddie Burciaga | 17th | 18th |
| Center Fielders | Luis Chavez | 2nd | Luis Chavez | 10th | 7th |
| Right Fielders | Tied for 17th | Tied for 14th | Tied for 21st | ||
| Starting Pitchers | Alfonso Caldera | 8th | Carlos Enciso | 13th | 7th |
| Relievers | Javier Lovato | 7th | Jonathan Ortiz | 3rd | 4th |
| Closers | Guillaume Fischer | 14th | Juan Garcia | 12th | 10th |
