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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Telem Jaime | 4th | Tied for 1st | 4th | |
| First Basemen | Vince Geiselman | 5th | Tied for 1st | 5th | |
| Second Basemen | Tied for 7th | Tied for 1st | Tied for 7th | ||
| Third Basemen | Corey Walker | 4th | Tied for 1st | 4th | |
| Shortstops | Tied for 3rd | Tied for 1st | Tied for 3rd | ||
| Left Fielders | Matt Phillips | 2nd | Tied for 1st | 2nd | |
| Center Fielders | Paul Miller | Tied for 4th | Tied for 1st | Tied for 4th | |
| Right Fielders | Nick Salgado | 6th | Tied for 1st | 6th | |
| Starting Pitchers | Dustin Heggen | 1st | Tied for 1st | 1st | |
| Relievers | Justin Geer | 1st | Tied for 1st | 1st | |
| Closers | Mike Maxwell | 2nd | Tied for 1st | 2nd |
