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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Dave Alberding | 9th | Tied for 1st | 9th | |
| First Basemen | Rich Stevenson | 10th | Tied for 1st | 10th | |
| Second Basemen | Branden Ivancich | 8th | Tied for 1st | 8th | |
| Third Basemen | Nick Henke | 5th | Tied for 1st | 5th | |
| Shortstops | Ricky Padron | 3rd | Tied for 1st | 3rd | |
| Left Fielders | Kevin Pope | 4th | Tied for 1st | 4th | |
| Center Fielders | Ivan Mendoza | 2nd | Tied for 1st | 2nd | |
| Right Fielders | Josh Hayes | 3rd | Tied for 1st | 3rd | |
| Starting Pitchers | Miguel Canales | 8th | Tied for 1st | 8th | |
| Relievers | Chad Foster | 7th | Tied for 1st | 7th | |
| Closers | Ryan Charbonneau | 2nd | Tied for 1st | 2nd |
